Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7918

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16285 and 16286 are separated by 194 nucleotides mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16,350 to 18,077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18,272 to 19,315 16286

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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17,331 + 16285 mRNA_7917 0.57 +1.3
17,480 - 16285 mRNA_7917 0.65 -0.6
17,684 - 16285 mRNA_7917 0.77 -1.7
17,789 - 16285 mRNA_7917 0.83 -0.9
17,900 + 16285 mRNA_7917 0.90 -3.2
18,055 + -1.4
18,058 - +0.3
18,219 + -2.4
18,322 - -1.3
18,351 - -1.2
18,358 - -1.2
18,417 - 16286 mRNA_7918 0.14 -1.7
18,480 - 16286 mRNA_7918 0.20 +1.1
18,788 - 16286 mRNA_7918 0.49 -1.1
18,791 - 16286 mRNA_7918 0.50 -0.4
18,915 + 16286 mRNA_7918 0.62 -1.1
18,916 - 16286 mRNA_7918 0.62 -0.8
19,036 + 16286 mRNA_7918 0.73 -0.3
19,095 + 16286 mRNA_7918 0.79 -2.3
19,100 - 16286 mRNA_7918 0.79 +0.3
19,378 - +0.5
19,588 + -1.4
19,654 - -2.1
19,764 - +0.5
19,817 - -2.3
19,831 - -0.5
19,837 + -0.5
19,914 + +1.2
19,934 - +0.2
19,935 + +0.6
20,235 + +2.4
20,291 - -0.7

Or see this region's nucleotide sequence