Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8082

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16449 and 16450 are separated by 477 nucleotides16450 and 16451 are separated by 197 nucleotides mRNA_8081: 16449 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 376,342 to 377,975 16449 mRNA_8082: 16450 - BLAST zinc-binding oxidoreductase [Moesziomyces antarcticus..., at 378,453 to 379,519 16450 mRNA_8083: 16451 - K17774 MDM10 mitochondrial distribution and morphology protein 10, at 379,717 to 381,351 16451

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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377,955 + +0.1
378,240 + -1.6
378,371 + -0.9
378,383 - -0.4
378,390 - +1.5

Or see this region's nucleotide sequence