Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8108

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16475 and 16476 are separated by 337 nucleotides16476 and 16477 are separated by 591 nucleotides mRNA_8107: 16475 - K01937 pyrG, CTPS CTP synthase, at 427,104 to 429,524 16475 mRNA_8108: 16476 - K17637 EXOC2, SEC5 exocyst complex component 2, at 429,862 to 433,885 16476 mRNA_8109: 16477 - K00679 E2.3.1.158 phospholipid-diacylglycerol acyltransferase, at 434,477 to 437,050 16477

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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429,584 - +2.4
429,700 - -2.2
429,708 - -0.9
429,710 - -2.7
429,710 + -0.3
429,718 - +0.8
429,726 + +1.8
429,728 - +1.3
429,736 - -1.6
429,737 + -0.4
429,742 + -0.3
429,746 + -2.0
429,770 + +0.5
429,879 + +0.4
429,884 + -0.5
429,890 + +0.1
433,840 + -0.0
433,943 + +2.4
433,945 - +1.7
433,966 + -0.8
433,972 - -0.4
433,973 - +0.3
433,974 - -0.5
434,100 + -0.9
434,111 + -0.4
434,119 + -1.0
434,226 - -1.4
434,245 + +1.7
434,548 + -1.1

Or see this region's nucleotide sequence