Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_164

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8531 and 8532 are separated by 299 nucleotides8532 and 8533 are separated by 411 nucleotides mRNA_163: 8531 - Hypothetical Protein, at 403,276 to 404,295 8531 mRNA_164: 8532 - Hypothetical Protein, at 404,595 to 407,143 8532 mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407,555 to 409,013 8533

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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403,681 + 8531 mRNA_163 0.40 -2.6
403,868 + 8531 mRNA_163 0.58 -0.3
403,941 - 8531 mRNA_163 0.65 -1.4
403,988 - 8531 mRNA_163 0.70 -1.2
404,253 + +0.9
404,422 - -0.6
404,437 + +0.2
404,441 + -2.0
404,558 + -1.7
404,576 + +0.4
405,261 - 8532 mRNA_164 0.26 -1.5
405,269 + 8532 mRNA_164 0.26 -0.2
405,367 + 8532 mRNA_164 0.30 +0.3
405,574 + 8532 mRNA_164 0.38 +0.2
405,727 + 8532 mRNA_164 0.44 -0.8
405,730 - 8532 mRNA_164 0.45 -0.7
405,997 - 8532 mRNA_164 0.55 -0.6
405,999 - 8532 mRNA_164 0.55 -1.2
406,000 + 8532 mRNA_164 0.55 -3.3
406,001 - 8532 mRNA_164 0.55 -1.7
406,001 + 8532 mRNA_164 0.55 -1.6
406,002 - 8532 mRNA_164 0.55 +0.6
406,022 - 8532 mRNA_164 0.56 -2.8
406,026 + 8532 mRNA_164 0.56 -0.4
406,037 - 8532 mRNA_164 0.57 +0.2
406,038 + 8532 mRNA_164 0.57 +0.3
406,183 + 8532 mRNA_164 0.62 -0.5
406,324 + 8532 mRNA_164 0.68 +0.1
406,326 + 8532 mRNA_164 0.68 -1.4
406,455 + 8532 mRNA_164 0.73 -0.5
406,457 + 8532 mRNA_164 0.73 -0.3
406,466 + 8532 mRNA_164 0.73 -1.0
406,468 - 8532 mRNA_164 0.73 -0.1
406,735 + 8532 mRNA_164 0.84 +0.2
406,737 + 8532 mRNA_164 0.84 +0.4
406,887 - 8532 mRNA_164 0.90 +0.1
407,039 - -2.3
407,178 + -0.8
407,180 + -0.1
407,188 - +0.0
407,490 - -3.1
407,505 - -0.7
407,516 + -0.3
407,652 + -1.2
407,800 + 8533 mRNA_165 0.17 -1.4

Or see this region's nucleotide sequence