Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_409

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8777 and 8778 are separated by 611 nucleotides mRNA_409: 8777 - K00667 FAS2 fatty acid synthase subunit alpha, fungi type, at 950,698 to 960,325 8777 mRNA_410: 8778 - HMMPfam-WD domain, G-beta repeat-PF00400, at 960,937 to 962,253 8778

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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949,939 + +0.4
950,537 + +0.8
950,541 + -1.4
950,670 - +0.1
954,269 + 8777 mRNA_409 0.37 -3.8

Or see this region's nucleotide sequence