Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_722

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9089 and 9090 are separated by 552 nucleotides9090 and 9091 are separated by 472 nucleotides mRNA_721: 9089 - Hypothetical Protein, at 1,720,522 to 1,720,982 9089 mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1,721,535 to 1,722,519 9090 mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1,722,992 to 1,724,496 9091

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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1,721,110 + -2.4
1,721,218 + -1.1
1,721,236 + +0.0
1,721,237 + -0.6
1,721,374 - +0.6
1,721,520 + +0.4
1,721,529 - -0.3
1,721,534 - +0.4
1,721,551 - +0.5
1,721,685 + 9090 mRNA_722 0.15 +1.6
1,721,700 + 9090 mRNA_722 0.17 -2.4
1,721,986 + 9090 mRNA_722 0.46 +0.3
1,722,134 + 9090 mRNA_722 0.61 -1.4
1,722,559 - -0.0
1,722,575 + +0.7
1,722,575 + -5.0
1,722,719 + +0.2
1,723,272 - 9091 mRNA_723 0.19 -0.2
1,723,280 + 9091 mRNA_723 0.19 +0.6
1,723,463 - 9091 mRNA_723 0.31 +0.6

Or see this region's nucleotide sequence