Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_937

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9305 and 9306 are separated by 456 nucleotides mRNA_937: 9305 - KOG1721 FOG Zn-finger, at 19,341 to 20,725 9305 mRNA_938: 9306 - Hypothetical Protein, at 21,182 to 22,697 9306

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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18,343 - -0.8
18,347 + -1.4
18,349 + -1.0
18,359 + +0.3
18,361 + -1.5
18,460 - -2.2
18,486 - +1.1
18,492 - +0.0
18,511 - +0.4
18,621 - +0.9
18,621 - +0.2
18,725 - -0.8
18,735 + -3.0
18,750 - -1.8
18,765 - -0.3
18,774 - -1.0
18,779 - -0.5
18,941 + -0.2
18,954 - +1.5
19,070 + -0.1
19,188 - -1.6
19,201 - -0.0
19,220 + -0.3
19,226 + +0.3
19,228 - +1.4
19,231 + -1.1
19,240 - -1.2
19,327 + -0.5
19,382 - -0.2
19,795 - 9305 mRNA_937 0.33 -1.1
19,849 - 9305 mRNA_937 0.37 -1.3
19,970 + 9305 mRNA_937 0.45 +0.2
20,041 - 9305 mRNA_937 0.51 +1.3
20,204 - 9305 mRNA_937 0.62 -2.9
20,491 - 9305 mRNA_937 0.83 -0.6
20,492 - 9305 mRNA_937 0.83 -0.5
20,494 + 9305 mRNA_937 0.83 -1.5
21,006 + +1.1
21,108 + -0.3
21,266 + -0.4
21,305 - -0.8
21,436 + 9306 mRNA_938 0.17 -3.6
21,543 - 9306 mRNA_938 0.24 -0.8
21,568 - 9306 mRNA_938 0.25 -2.2
21,587 - 9306 mRNA_938 0.27 -2.6
21,588 + 9306 mRNA_938 0.27 -0.2

Or see this region's nucleotide sequence