Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_955

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9322 and 9323 are separated by 918 nucleotides9323 and 9324 are separated by 297 nucleotides mRNA_954: 9322 - K16261 YAT yeast amino acid transporter, at 55,166 to 57,720 9322 mRNA_955: 9323 - Hypothetical Protein, at 58,639 to 63,739 9323 mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64,037 to 66,119 9324

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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57,888 - -0.5
58,061 - +0.9
58,483 + -0.2
58,649 + +0.7
58,936 - -0.5
58,947 + -1.4
59,228 + 9323 mRNA_955 0.12 -0.8
59,238 - 9323 mRNA_955 0.12 -0.7
59,245 + 9323 mRNA_955 0.12 -0.3
59,344 + 9323 mRNA_955 0.14 -0.7
59,376 - 9323 mRNA_955 0.14 +0.3
59,612 + 9323 mRNA_955 0.19 -0.2
60,605 + 9323 mRNA_955 0.39 -2.3
60,718 - 9323 mRNA_955 0.41 -0.1
61,023 - 9323 mRNA_955 0.47 -1.0
61,073 - 9323 mRNA_955 0.48 +0.4
61,233 - 9323 mRNA_955 0.51 +1.5
61,242 - 9323 mRNA_955 0.51 -0.7
61,275 + 9323 mRNA_955 0.52 -0.6
61,764 + 9323 mRNA_955 0.61 -0.0
61,955 + 9323 mRNA_955 0.65 -0.2
62,153 - 9323 mRNA_955 0.69 +0.2
62,159 + 9323 mRNA_955 0.69 +1.1
62,361 - 9323 mRNA_955 0.73 +0.0
62,439 + 9323 mRNA_955 0.74 -0.6
62,507 + 9323 mRNA_955 0.76 +1.1
62,517 - 9323 mRNA_955 0.76 -2.0
62,523 + 9323 mRNA_955 0.76 -0.4
62,524 + 9323 mRNA_955 0.76 -1.4
62,552 - 9323 mRNA_955 0.77 -0.2
62,731 + 9323 mRNA_955 0.80 -0.4
62,744 - 9323 mRNA_955 0.80 -0.6
62,744 - 9323 mRNA_955 0.80 +0.9
63,059 + 9323 mRNA_955 0.87 -0.7
63,068 - 9323 mRNA_955 0.87 +1.4
63,206 - 9323 mRNA_955 0.90 -0.3
63,260 + -0.3
63,474 + -0.5
63,856 - -0.4
64,193 + -1.1
64,227 - -0.8
64,494 + 9324 mRNA_956 0.22 -0.2

Or see this region's nucleotide sequence