Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1054

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9421 and 9422 are separated by 112 nucleotides mRNA_1053: 9421 - KOG3856 Uncharacterized conserved protein, at 287,075 to 287,902 9421 mRNA_1054: 9422 - K09419 HSFF heat shock transcription factor, other eukaryote, at 288,015 to 290,756 9422

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
287,085 + -2.4
287,966 + +0.1
290,843 - -1.8
290,850 + +1.2
290,879 + -2.0
290,883 - +0.5
290,945 - -0.7
290,950 - -2.0
290,967 + +0.1
290,967 + +0.4
290,982 + +1.6
290,985 + -2.1
290,988 - +0.4
291,002 - -2.0
291,083 - -0.1
291,088 - +1.0
291,093 - +0.7
291,102 + +0.7
291,146 - -0.1
291,157 - +0.3
291,158 + -0.9
291,199 + -0.4
291,253 - -0.1
291,269 + -0.7
291,321 - -1.6
291,383 - -0.7
291,415 + -2.6
291,429 + -0.7
291,444 - +1.7
291,448 - -0.5
291,460 + +0.4
291,460 + +0.1
291,462 - +0.6
291,467 + -1.2
291,482 + +0.8
291,500 + -0.6
291,513 + +0.5
291,627 - +1.5
291,633 - +0.4
291,642 + +0.3
291,662 - -0.1
291,664 - -2.9
291,668 + -0.1
291,669 + +0.4
291,681 + +0.3
291,685 + +0.5
291,685 - -1.2
291,739 + -1.2
291,740 + +0.6
291,743 - -0.3
291,747 + -0.5
291,748 - -0.9
291,752 - -1.2

Or see this region's nucleotide sequence