Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1324

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9691 and 9692 are separated by 526 nucleotides mRNA_1323: 9691 - Hypothetical Protein, at 929,685 to 931,310 9691 mRNA_1324: 9692 - Hypothetical Protein, at 931,837 to 933,855 9692

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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930,867 - 9691 mRNA_1323 0.73 -0.1
930,909 - 9691 mRNA_1323 0.75 -2.1
930,911 - 9691 mRNA_1323 0.75 -2.3
931,056 - 9691 mRNA_1323 0.84 -1.3
931,105 + 9691 mRNA_1323 0.87 -2.3
931,196 - +0.7
931,535 + -0.7
931,627 - -1.6
931,629 + -1.0
931,682 + -2.1
931,708 + -0.4
931,801 + +2.6
931,929 - -2.5
931,935 + -2.8
931,942 - -1.3
932,059 + 9692 mRNA_1324 0.11 -2.3
932,348 - 9692 mRNA_1324 0.25 -0.8
932,355 + 9692 mRNA_1324 0.26 -0.7
932,441 + 9692 mRNA_1324 0.30 -1.1
932,441 - 9692 mRNA_1324 0.30 -2.8
932,484 - 9692 mRNA_1324 0.32 -1.9
932,489 - 9692 mRNA_1324 0.32 -1.7
932,526 - 9692 mRNA_1324 0.34 -2.4
932,871 + 9692 mRNA_1324 0.51 -3.0
933,005 + 9692 mRNA_1324 0.58 -1.0
933,025 - 9692 mRNA_1324 0.59 -1.2
933,070 + 9692 mRNA_1324 0.61 -0.8
933,248 - 9692 mRNA_1324 0.70 -4.1
933,344 + 9692 mRNA_1324 0.75 -2.6
933,396 + 9692 mRNA_1324 0.77 +0.2
933,530 - 9692 mRNA_1324 0.84 -0.5
933,554 + 9692 mRNA_1324 0.85 -1.4
933,843 + +0.1
933,877 - -1.3
933,911 + -0.5
933,927 + -3.1
933,938 - -1.2
933,942 - +0.6
933,984 + -1.2
933,990 - -1.3
934,003 - -0.9
934,284 + -0.8
934,292 - -1.6
934,322 + -1.1
934,378 - -0.9
934,416 - -0.7
934,417 + -1.8
934,701 + -0.7
934,734 + -0.6
934,811 - -1.2

Or see this region's nucleotide sequence