Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1395

Experiment: Sorted High BODIPY Gate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1395: 9763 - K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase, at 166,519 to 170,946 9763

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Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
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165,693 - -0.9
165,772 - -1.0
165,835 + -0.4
165,942 - +0.6
166,334 - +0.5
169,339 + 9763 mRNA_1395 0.64 +2.6
169,697 - 9763 mRNA_1395 0.72 -1.6
169,840 + 9763 mRNA_1395 0.75 -1.2
169,997 - 9763 mRNA_1395 0.79 -2.3
170,035 - 9763 mRNA_1395 0.79 -1.4
170,041 + 9763 mRNA_1395 0.80 -1.7
170,145 + 9763 mRNA_1395 0.82 -0.3
170,151 - 9763 mRNA_1395 0.82 -1.1
170,173 + 9763 mRNA_1395 0.83 -0.5
170,207 + 9763 mRNA_1395 0.83 -2.3
170,209 + 9763 mRNA_1395 0.83 -0.6
170,328 + 9763 mRNA_1395 0.86 -1.3
170,459 - 9763 mRNA_1395 0.89 +0.6
170,465 + 9763 mRNA_1395 0.89 -0.8
171,053 + -0.1
171,066 - +0.4
171,340 - -4.6
171,513 - -1.7
171,624 - -0.1
171,646 - -1.6
171,652 - -0.8
171,654 - +1.0
171,922 + +0.6
171,923 + -1.8
171,934 + -0.3
171,936 - -0.2
171,937 + -0.4

Or see this region's nucleotide sequence