Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1621

Experiment: Sorted High BODIPY Gate

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9988 and 9989 are separated by 693 nucleotides9989 and 9990 are separated by 329 nucleotides mRNA_1620: 9988 - Hypothetical Protein, at 737,944 to 741,201 9988 mRNA_1621: 9989 - Hypothetical Protein, at 741,895 to 743,431 9989 mRNA_1622: 9990 - K17738 ARD D-arabinitol 2-dehydrogenase, at 743,761 to 745,808 9990

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction Sorted High BODIPY Gate
remove
740,995 - -0.4
741,135 + +0.4
741,505 - -0.0
741,536 + -0.2
741,662 - -0.6
741,685 + +0.5
741,689 + -0.5
741,692 - -0.8
741,693 - +0.7
741,693 - -0.7
741,696 + -0.0
741,719 - -2.6
741,719 - +0.1
741,721 + -0.4
741,759 + +0.1
741,759 - -1.4
741,768 - -0.5
741,779 + -1.8
741,888 + +0.1
741,909 + +1.2
741,921 + +0.1
741,927 - -2.3
741,952 - -0.2
742,057 + 9989 mRNA_1621 0.11 +1.5
742,080 - 9989 mRNA_1621 0.12 +0.4
742,351 + 9989 mRNA_1621 0.30 +0.2
742,486 - 9989 mRNA_1621 0.38 -0.1
742,923 + 9989 mRNA_1621 0.67 -0.4
743,027 - 9989 mRNA_1621 0.74 +1.0
743,070 - 9989 mRNA_1621 0.76 -0.1
743,397 + -0.7
743,677 + -0.7

Or see this region's nucleotide sequence