Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2187

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10554 and 10555 are separated by 371 nucleotides10555 and 10556 are separated by 941 nucleotides mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289,914 to 291,585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291,957 to 293,217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294,159 to 294,788 10556

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
291,673 + +0.1
291,697 - +0.0
291,712 + -0.9
291,714 - -0.2
291,838 + -0.5
291,858 + +0.1
292,132 - 10555 mRNA_2187 0.14 -0.3
293,511 + +0.5
294,058 + -0.6
294,077 + +1.3

Or see this region's nucleotide sequence