Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2330

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2330: 10698 - KOG0583 Serine/threonine protein kinase, at 627,828 to 630,238 10698

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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626,888 - +1.5
626,891 - -0.4
626,996 + -0.5
627,025 - -0.0
627,030 + +0.8
627,054 + +0.3
627,172 - -1.2
627,172 + -0.0
627,189 + +0.2
627,196 - +1.8
627,213 - +0.7
627,312 - +0.4
627,324 + -0.3
627,353 - +0.5
627,373 + -0.5
627,379 + +0.8
627,487 - +1.0
627,508 + +0.1
627,609 - -0.3
627,648 + +0.0
627,665 + +1.3
627,665 + +0.7
627,683 - +0.5
627,907 - -0.1
628,826 - 10698 mRNA_2330 0.41 +0.5
629,401 + 10698 mRNA_2330 0.65 +1.3
629,519 - 10698 mRNA_2330 0.70 -0.8
630,117 - -1.7
630,247 + +0.0
630,268 + +0.7
630,271 - -0.4
630,274 - +1.3
630,275 - -0.9
630,288 + +1.7
630,409 - -0.8
630,427 - -0.3
630,434 + -0.3
630,445 - +0.3
630,460 + -0.5
630,467 + +0.7
630,474 + -0.3
630,582 + -0.4
630,588 + -2.2
630,592 - +0.3
630,601 - +0.3
630,602 + -2.3
630,603 - +0.1
630,604 + -1.0
630,605 - +0.2
630,607 - -0.2
630,608 + +1.3
630,608 - -0.4
630,609 + -1.4
630,611 - -0.4
630,613 - -0.2
630,616 - +0.7
630,617 + -0.3
630,620 + +0.3
630,620 + +0.9
630,620 - +0.5
630,621 + -0.8
630,622 + +0.4
630,622 + +0.5
630,622 + -2.4
630,625 + +0.1
630,656 + +0.3
630,658 - +0.3
630,678 + -0.3
630,709 - +0.2
630,710 - +1.4
630,710 + -0.4
630,714 - -0.4
630,727 - -0.7
630,731 - -1.3
630,732 - +2.2
630,734 + -2.0
630,735 - -0.4
630,736 + -0.4
630,736 - -1.0
630,739 - -0.3
630,750 + -0.3
630,751 - -0.4
630,755 - -0.1
630,755 + +0.2
630,757 - -0.7
630,760 - -0.4
630,764 + +0.5
630,766 + +0.0
630,767 + -0.6
630,767 + -0.7
630,771 + -0.1
630,780 + -0.2
630,985 - +1.0
631,022 - +0.0
631,032 - -0.8
631,049 - -1.6
631,053 - -1.0
631,055 + -0.7
631,058 + -0.3
631,060 - +0.7
631,070 + +0.2
631,092 + -0.2
631,130 - +0.6

Or see this region's nucleotide sequence