Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2361

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10728 and 10729 are separated by 421 nucleotides mRNA_2360: 10728 - Hypothetical Protein, at 702,511 to 702,996 10728 mRNA_2361: 10729 - Hypothetical Protein, at 703,418 to 705,625 10729

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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702,448 - +0.0
702,589 - 10728 mRNA_2360 0.16 +0.1
702,618 - 10728 mRNA_2360 0.22 -0.4
702,895 + 10728 mRNA_2360 0.79 -0.2
703,058 + -0.0
703,179 - +0.7
703,350 + +0.3
703,585 + +1.8
703,929 - 10729 mRNA_2361 0.23 +0.1
704,087 + 10729 mRNA_2361 0.30 +0.0
704,371 - 10729 mRNA_2361 0.43 +0.4
704,486 - 10729 mRNA_2361 0.48 -0.2
704,648 - 10729 mRNA_2361 0.56 -1.4
704,661 - 10729 mRNA_2361 0.56 -0.7
704,672 + 10729 mRNA_2361 0.57 -1.6
704,818 - 10729 mRNA_2361 0.63 -0.7
705,095 + 10729 mRNA_2361 0.76 +1.8
705,102 - 10729 mRNA_2361 0.76 -1.4
705,125 + 10729 mRNA_2361 0.77 +1.0
705,176 - 10729 mRNA_2361 0.80 +0.3
705,384 - 10729 mRNA_2361 0.89 +0.6
705,403 + 10729 mRNA_2361 0.90 -0.1
706,094 - +0.4
706,252 - -1.0
706,285 - -1.6
706,540 - -0.9
706,542 - -1.1

Or see this region's nucleotide sequence