Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2374

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10742 and 10743 are separated by 241 nucleotides mRNA_2374: 10742 - K12897 TRA2 transformer-2 protein, at 746,572 to 748,318 10742 mRNA_2375: 10743 - Hypothetical Protein, at 748,560 to 749,428 10743

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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745,573 + -0.5
745,729 + +0.2
745,832 - +0.2
745,851 - -0.6
745,859 + -0.6
745,874 + +0.3
746,168 - -0.0
746,443 - +0.1
748,354 - -0.3
748,361 - +0.1
748,368 - +1.5
748,534 + +1.3
748,800 - 10743 mRNA_2375 0.28 +1.1
748,810 - 10743 mRNA_2375 0.29 -0.0
748,816 - 10743 mRNA_2375 0.29 -0.2
748,967 - 10743 mRNA_2375 0.47 -0.7
748,981 + 10743 mRNA_2375 0.48 -0.1

Or see this region's nucleotide sequence