Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2464

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10831 and 10832 are separated by 775 nucleotides mRNA_2463: 10831 - Hypothetical Protein, at 200,051 to 202,030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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201,958 + -0.6
202,094 + +0.2
202,109 + +0.2
202,117 - +0.4
202,127 - +0.2
202,215 - -0.4
202,218 + -0.4
202,244 - +0.2
202,252 - -1.3
202,255 + -0.3
202,256 - -0.0
202,264 + -0.4
202,266 - -0.5
202,270 - +0.3
202,270 + -0.4
202,279 + -1.4
202,279 - -1.7
202,279 - -1.3
202,282 - -1.0
202,288 + +0.2
202,288 + +1.6
202,328 + -0.4
202,329 - -0.1
202,362 - +0.2
202,376 - +0.1
202,376 - +0.7
202,378 + -0.5
202,378 - +0.1
202,380 - -0.8
202,424 + +0.2
202,427 + -0.5
202,432 - -0.3
202,434 + -0.5
202,439 + +1.0
202,442 - -0.5
202,442 + +0.1
202,444 + +0.2
202,447 + +1.4
202,449 + -0.2
202,450 - -0.8
202,452 + +0.1
202,452 + -1.9
202,458 + -0.6
202,461 - +0.0
202,462 + -0.4
202,465 + +0.2
202,465 - +0.2
202,474 + -0.7
202,476 + +0.5
202,488 + +0.6
202,489 + +0.9
202,491 + -0.1
202,493 + -1.2
202,499 - -0.2
202,501 - -1.7
202,502 + +0.0
202,507 - -0.2
202,520 + -0.7
202,524 + -0.3
202,524 + +0.7
202,525 - +0.9
202,535 - +1.4
202,544 + +0.7
202,546 - -0.2
202,552 - -2.1
202,562 + +0.7
202,580 - -0.3
202,594 + +0.3
202,597 - -0.6
202,625 - -0.9
202,680 - -0.0
202,683 + +0.4
202,695 + +0.6
202,705 - +0.5
202,716 - +0.3
202,730 + -0.9
202,733 - +0.1
202,744 - -2.4
202,769 + -0.0

Or see this region's nucleotide sequence