Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2531

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10899 and 10900 are separated by 173 nucleotides mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372,269 to 375,397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375,571 to 377,208 10900

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
371,550 + +0.1
371,642 + -0.4
371,663 - -0.4
371,667 + -0.4
371,813 + +1.3
371,927 - -1.0
371,932 - -0.5
371,943 - -0.5
371,943 - -0.4
371,948 - -0.5
371,956 - -0.3
372,111 + +0.0
372,135 - +0.0
372,512 - -0.4
372,997 - 10899 mRNA_2531 0.23 -1.0
373,027 + 10899 mRNA_2531 0.24 -3.4
373,157 + 10899 mRNA_2531 0.28 +2.1
373,399 - 10899 mRNA_2531 0.36 -0.2
373,667 + 10899 mRNA_2531 0.45 -0.3
373,737 - 10899 mRNA_2531 0.47 -1.0
374,341 - 10899 mRNA_2531 0.66 +0.2
374,774 + 10899 mRNA_2531 0.80 +0.3
375,306 + +0.5
375,339 + -0.8
375,345 - +0.4
375,473 - -1.4
375,501 + -0.8
375,506 + -0.5
375,561 - -1.6

Or see this region's nucleotide sequence