Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2608

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2608: 10976 - Hypothetical Protein, at 584,505 to 585,992 10976

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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583,584 - +1.5
583,626 + -1.2
583,891 - -0.0
583,895 + -0.4
584,385 + +0.2
584,506 - +0.7
584,581 - +0.0
584,601 - -0.2
584,938 - 10976 mRNA_2608 0.29 -0.1
584,968 + 10976 mRNA_2608 0.31 -0.1
585,171 + 10976 mRNA_2608 0.45 +0.9
585,175 - 10976 mRNA_2608 0.45 +0.2
585,244 - 10976 mRNA_2608 0.50 -1.7
585,311 + 10976 mRNA_2608 0.54 +0.2
585,330 - 10976 mRNA_2608 0.55 -2.2
585,335 - 10976 mRNA_2608 0.56 -0.1
585,346 + 10976 mRNA_2608 0.57 -1.6
585,350 + 10976 mRNA_2608 0.57 -0.9
585,752 + 10976 mRNA_2608 0.84 +1.3
585,934 - +0.0
586,101 - -2.2
586,221 - +2.2
586,350 - +0.8
586,358 - -0.4
586,502 + +0.5
586,502 + -1.2
586,554 + +0.1
586,946 - -1.0

Or see this region's nucleotide sequence