Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2662

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11030 and 11031 are separated by 525 nucleotides mRNA_2662: 11030 - Interpro Bacterial protein of unknown function (HtrL_YibB), at 705,643 to 707,120 11030 mRNA_2663: 11031 - Hypothetical Protein, at 707,646 to 708,293 11031

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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704,831 + -0.4
704,953 - -0.5
704,958 + +0.4
704,964 - -0.3
704,973 + -1.6
704,979 + -0.6
704,995 + -1.0
705,012 + +0.3
705,108 - -0.8
705,120 - -0.1
705,120 - -0.8
705,122 - -0.6
705,127 + -0.2
705,132 - +0.9
705,134 - +1.8
705,137 - +0.3
705,140 - +0.9
705,140 - -0.6
705,142 + +0.1
705,149 - +0.2
705,149 - -1.2
705,151 + -0.1
705,153 - +0.1
705,172 + -0.3
705,182 + +0.2
705,184 - +0.3
705,191 + +0.4
705,203 - -0.2
705,216 + +0.6
705,216 + -1.3
705,224 - -0.8
705,226 + -0.3
705,227 + +0.1
705,235 - +0.9
705,238 - +0.4
705,240 + -0.4
705,243 + +0.1
705,244 + +0.0
705,249 + -0.1
705,252 + +0.6
705,254 - -1.3
705,257 + -2.2
705,315 + -0.6
705,342 + -0.1
705,347 - +0.5
705,354 + +2.0
705,354 + -0.3
705,363 - -2.0
705,373 - +0.4
705,379 - -0.9
705,380 - +0.7
705,386 - +0.1
705,388 - -0.5
705,394 + -1.0
705,402 - -0.4
705,436 + +0.7
705,439 + -0.1
705,441 - -0.3
705,448 + -0.1
705,455 - +1.1
705,464 + +0.1
705,489 - +0.3
705,499 - +0.8
705,508 + +0.2
705,512 - +0.2
705,513 - +0.2
705,515 - -0.0
705,516 - +1.0
705,520 - -0.1
705,524 + -0.2
705,530 + +0.2
705,530 + -0.9
705,531 - -0.2
705,532 + -1.3
705,533 + -0.0
705,534 + -0.1
705,536 + +0.1
705,540 - +0.5
705,541 - -0.6
705,543 - -0.2
705,545 - -2.0
705,546 - -2.1
705,548 + +0.1
705,551 - +0.1
705,552 + +0.0
705,553 + +0.3
705,556 - +0.2
705,561 + -0.6
705,562 + +0.6
705,563 - -0.7
705,564 + -0.4
705,565 + -0.5
705,569 + -0.9
705,569 + -2.8
705,576 - -0.5
705,582 - +0.2
705,588 - +0.1
705,592 + -0.5
705,597 + +1.1
705,675 - +0.2
705,697 + +0.4
705,726 + -1.2
705,728 - +0.4
705,728 + -0.1
705,737 - +0.0
705,755 + +0.6
705,845 + 11030 mRNA_2662 0.14 -0.5
705,868 + 11030 mRNA_2662 0.15 +0.3
705,892 - 11030 mRNA_2662 0.17 -0.2
705,917 + 11030 mRNA_2662 0.19 +0.3
706,006 + 11030 mRNA_2662 0.25 +1.0
706,114 - 11030 mRNA_2662 0.32 -0.4
706,917 + 11030 mRNA_2662 0.86 +1.3
707,047 - +0.4
707,061 - +0.8
707,184 + -0.8
707,203 - +0.6
707,206 - -0.2
707,233 - -0.5
707,311 - -0.3
707,321 + -0.3
707,331 - +0.6
707,346 + +0.3
707,382 + -0.1
707,590 - +0.2
707,657 + -0.9

Or see this region's nucleotide sequence