Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2896

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11263 and 11264 are separated by 558 nucleotides11264 and 11265 are separated by 338 nucleotides mRNA_2895: 11263 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 476,493 to 477,623 11263 mRNA_2896: 11264 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 478,182 to 479,265 11264 mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479,604 to 482,899 11265

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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477,269 + 11263 mRNA_2895 0.69 +1.0
477,666 + -0.1
477,770 - -0.2
477,896 + +0.0
477,907 + +0.3
478,340 - 11264 mRNA_2896 0.15 +0.0
478,659 + 11264 mRNA_2896 0.44 +0.7
479,515 + +0.2
479,520 - +0.6
479,541 - +0.5
479,550 + -0.5

Or see this region's nucleotide sequence