Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2900

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11268 and 11269 are separated by 671 nucleotides mRNA_2900: 11268 - BLAST pyridoxamine-phosphate oxidase [Moniliophthora ro..., at 493,675 to 494,245 11268 mRNA_2901: 11269 - KOG1289 Amino acid transporters, at 494,917 to 497,480 11269

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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492,686 - -1.7
492,716 - +0.4
492,778 + +0.3
492,872 - -0.2
492,889 + +0.5
493,340 - -1.8
493,379 - -1.2
493,640 - -0.3
494,113 + 11268 mRNA_2900 0.77 -0.2
494,367 + -1.8
494,433 + -0.4
494,489 + +0.6
494,513 + -0.5
494,547 + -1.9
494,604 - -1.0
494,604 - +0.5
494,635 - +0.4
494,646 + +0.2
494,651 + +0.1
494,655 + +1.4
494,655 - -0.4
494,656 + -0.5
494,684 + -1.6
494,684 - +0.5
494,687 - -1.5
494,692 - -0.1
494,699 - +0.1
494,700 - -0.7
494,701 + -1.3
494,717 + -1.6
494,722 - -0.7
494,816 + +0.6
494,818 - +0.7
494,837 - -0.7
494,851 - -1.3
494,861 + +0.1
494,874 + +2.0
494,927 - -0.6
494,988 - -0.6
495,011 - +0.2
495,016 - -0.2
495,052 + +0.0
495,129 - +0.4
495,162 - -1.4

Or see this region's nucleotide sequence