Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3531

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11899 and 11900 are separated by 116 nucleotides mRNA_3531: 11899 - K00604 MTFMT, fmt methionyl-tRNA formyltransferase, at 324,086 to 325,765 11899 mRNA_3532: 11900 - K00670 NAA30, MAK3 N-alpha-acetyltransferase 30, at 325,882 to 326,936 11900

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
323,095 + -2.2
323,649 - +0.9
323,654 - -1.2
323,654 + +0.2
323,676 + -0.3
323,679 - -0.4
323,680 + +2.6
323,798 - -1.1
323,803 - +0.0
323,805 + -0.6
323,814 + -0.2
323,816 + +0.2
323,931 + -0.4
325,803 + -0.5
325,811 - +0.4
325,879 + +0.5
326,136 - 11900 mRNA_3532 0.24 +1.1
326,152 - 11900 mRNA_3532 0.26 +1.2
326,158 + 11900 mRNA_3532 0.26 +1.9
326,167 - 11900 mRNA_3532 0.27 +1.1
326,179 + 11900 mRNA_3532 0.28 +1.1
326,192 - 11900 mRNA_3532 0.29 +1.1
326,202 - 11900 mRNA_3532 0.30 +0.4
326,249 - 11900 mRNA_3532 0.35 +1.2
326,266 - 11900 mRNA_3532 0.36 +2.2
326,266 + 11900 mRNA_3532 0.36 +1.7
326,274 - 11900 mRNA_3532 0.37 +0.4
326,290 + 11900 mRNA_3532 0.39 +1.3
326,312 - 11900 mRNA_3532 0.41 +1.2
326,326 + 11900 mRNA_3532 0.42 +1.5
326,326 + 11900 mRNA_3532 0.42 +2.2
326,326 - 11900 mRNA_3532 0.42 +1.1
326,343 - 11900 mRNA_3532 0.44 +0.7
326,347 + 11900 mRNA_3532 0.44 +1.3
326,364 - 11900 mRNA_3532 0.46 +1.7
326,365 - 11900 mRNA_3532 0.46 +1.8
326,390 - 11900 mRNA_3532 0.48 +0.6
326,391 + 11900 mRNA_3532 0.48 +1.5
326,419 - 11900 mRNA_3532 0.51 +0.6
326,426 - 11900 mRNA_3532 0.52 +1.5
326,531 - 11900 mRNA_3532 0.62 +0.8
326,545 + 11900 mRNA_3532 0.63 +0.0
326,554 + 11900 mRNA_3532 0.64 +2.2
326,640 + 11900 mRNA_3532 0.72 +1.6
326,682 - 11900 mRNA_3532 0.76 +1.2

Or see this region's nucleotide sequence