Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3652

Experiment: YNB Oleic Acid

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	YNB Oleic Acid
258,563	+	12019	mRNA_3651	0.46	+0.5
258,579	-	12019	mRNA_3651	0.49	-1.8
258,584	-	12019	mRNA_3651	0.50	+0.0
258,588	+	12019	mRNA_3651	0.51	-0.4
258,589	+	12019	mRNA_3651	0.51	-0.8
258,590	+	12019	mRNA_3651	0.51	-0.6
258,876	+				+0.1
258,882	-				-0.2
258,982	-				-0.7
259,004	-				-0.4
259,010	-				-1.5
259,011	+				-0.0
259,110	-				-0.1
259,149	-				+0.2
259,306	+				-0.2
259,431	-				-1.4
259,459	+				-0.0
259,576	-	12020	mRNA_3652	0.14	-0.2
259,600	+	12020	mRNA_3652	0.17	-0.4
259,727	+	12020	mRNA_3652	0.33	-2.0
259,736	-	12020	mRNA_3652	0.34	-0.5
259,766	+	12020	mRNA_3652	0.38	-0.0
259,915	+	12020	mRNA_3652	0.56	-0.1
260,019	+	12020	mRNA_3652	0.69	-0.4
260,029	+	12020	mRNA_3652	0.70	-0.7
260,045	+	12020	mRNA_3652	0.72	+0.7
260,322	-				+1.0
260,324	+				-0.8
260,329	-				+0.0
260,330	+				-0.5
260,335	+				-0.4
260,336	+				+0.3
260,340	+				-0.8
260,458	-				-0.9
260,490	+				-0.0
260,498	+				+0.1
260,517	+				-0.6
260,620	-				+0.5
260,620	-				+0.2
260,659	+				+0.3
260,772	+	12021	mRNA_3653	0.11	+0.2
260,779	+	12021	mRNA_3653	0.11	+0.1
260,781	+	12021	mRNA_3653	0.11	-0.3
260,787	+	12021	mRNA_3653	0.11	+0.7
260,792	+	12021	mRNA_3653	0.11	-0.1
260,816	+	12021	mRNA_3653	0.12	-0.1
260,928	-	12021	mRNA_3653	0.15	+0.8
260,947	+	12021	mRNA_3653	0.16	+0.4
261,105	+	12021	mRNA_3653	0.20	+0.3