Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3952

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12319 and 12320 are separated by 85 nucleotides12320 and 12321 are separated by 162 nucleotides mRNA_3951: 12319 - K02967 RP-S2, MRPS2, rpsB small subunit ribosomal protein S2, at 980,459 to 981,716 12319 mRNA_3952: 12320 - KOG1018 Cytosine deaminase FCY1 and related enzymes, at 981,802 to 983,195 12320 mRNA_3953: 12321 - Hypothetical Protein, at 983,358 to 984,692 12321

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
981,699 - +0.6
981,730 + +1.9
981,751 + -0.1
981,876 + +1.0
981,902 - -1.0
982,047 - 12320 mRNA_3952 0.18 -0.5
982,050 + 12320 mRNA_3952 0.18 -2.6
982,210 - 12320 mRNA_3952 0.29 +0.2
982,326 - 12320 mRNA_3952 0.38 -0.1
982,465 - 12320 mRNA_3952 0.48 +1.9
982,469 - 12320 mRNA_3952 0.48 -0.6
982,476 - 12320 mRNA_3952 0.48 +0.4
982,979 - 12320 mRNA_3952 0.84 -0.2
983,188 - +0.8
983,195 + -0.3
983,203 - -1.6
983,307 + +0.2
983,503 + 12321 mRNA_3953 0.11 -1.0
983,656 - 12321 mRNA_3953 0.22 +0.1
983,662 + 12321 mRNA_3953 0.23 +0.3
983,918 + 12321 mRNA_3953 0.42 +1.9
984,124 + 12321 mRNA_3953 0.57 -0.1

Or see this region's nucleotide sequence