Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4586

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12953 and 12954 are separated by 233 nucleotides mRNA_4585: 12953 - SUPERFAMILY--SSF103473, at 526,497 to 528,503 12953 mRNA_4586: 12954 - K16075 MRS2, MFM1 magnesium transporter, at 528,737 to 530,080 12954

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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528,611 - -0.5
528,647 + +0.2
528,652 + +0.3
528,899 - 12954 mRNA_4586 0.12 +0.3
528,906 + 12954 mRNA_4586 0.13 -0.9
529,200 + 12954 mRNA_4586 0.34 -0.9
529,335 + 12954 mRNA_4586 0.44 -0.2
529,666 + 12954 mRNA_4586 0.69 +0.5
529,708 - 12954 mRNA_4586 0.72 -1.6
529,759 - 12954 mRNA_4586 0.76 -0.2
529,905 - 12954 mRNA_4586 0.87 +1.6
530,342 + -2.0
530,346 - -0.6
530,484 + -0.2
530,533 + +0.1
530,637 - -1.5
530,638 - -1.0
530,655 - -1.0
530,792 - +0.7
530,819 + +0.3

Or see this region's nucleotide sequence