Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4797

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13164 and 13165 are separated by 748 nucleotides13165 and 13166 are separated by 622 nucleotides mRNA_4796: 13164 - Hypothetical Protein, at 1,031,136 to 1,031,744 13164 mRNA_4797: 13165 - K02901 RP-L27e, RPL27 large subunit ribosomal protein L27e, at 1,032,493 to 1,033,632 13165 mRNA_4798: 13166 - Hypothetical Protein, at 1,034,255 to 1,037,154 13166

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,031,908 - +0.1
1,032,061 - -1.5
1,032,110 - -0.4
1,032,110 - +1.4
1,032,401 + +0.1
1,034,020 + +0.3
1,034,026 + +1.2
1,034,173 - +1.2
1,034,178 + +0.4
1,034,300 - -0.9
1,034,304 + -0.3
1,034,315 - -0.1
1,034,338 - -0.3
1,034,476 + -0.9

Or see this region's nucleotide sequence