Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5104

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13471 and 13472 are separated by 729 nucleotides13472 and 13473 are separated by 724 nucleotides mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1,758,671 to 1,763,554 13471 mRNA_5104: 13472 - Hypothetical Protein, at 1,764,284 to 1,764,496 13472 mRNA_5105: 13473 - HMMPfam-Frequency clock protein-PF09421, at 1,765,221 to 1,768,687 13473

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
1,763,733 + -0.5
1,763,784 + +0.1
1,764,053 + -0.1
1,764,383 + 13472 mRNA_5104 0.46 +0.0
1,764,785 + -3.2
1,764,955 - -1.4
1,764,962 - +0.5
1,765,038 + -1.4
1,765,079 + -0.1
1,765,087 + -0.0
1,765,095 - -0.0
1,765,101 - -1.2
1,765,134 - +0.4
1,765,146 + -1.0
1,765,251 + +0.8
1,765,279 + +0.1
1,765,397 + +0.5

Or see this region's nucleotide sequence