Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5256

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5256: 13624 - SUPERFAMILY--SSF53448, at 292,144 to 293,863 13624

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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291,455 + -1.6
291,587 - +1.2
291,589 + -0.5
291,602 + -0.2
291,727 - -1.3
291,745 + -1.1
291,745 + +0.1
291,747 + +0.7
291,753 + -1.5
291,754 + -0.7
291,756 - -2.1
291,757 + -1.6
291,758 - -1.2
291,826 + +0.3
291,835 + -0.5
291,923 - +0.0
292,115 - -1.0
292,130 + +0.2
292,286 + -0.5
292,699 - 13624 mRNA_5256 0.32 -0.2
293,052 - 13624 mRNA_5256 0.53 +0.1
293,080 + 13624 mRNA_5256 0.54 +0.7
293,460 + 13624 mRNA_5256 0.77 +0.9
293,631 - 13624 mRNA_5256 0.86 +0.7
294,099 - +0.2
294,199 + -0.0
294,365 + +2.3
294,376 + +0.1
294,509 + -0.6
294,514 + -0.7
294,534 + -0.2
294,672 + -0.7
294,679 + -0.6
294,686 + -0.9
294,692 + +0.5
294,696 + -1.1
294,700 + -0.6
294,700 - -0.2
294,725 + -1.3
294,797 + -0.1
294,861 + -1.1

Or see this region's nucleotide sequence