Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5347

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13714 and 13715 are separated by 889 nucleotides mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504,794 to 508,994 13714 mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509,884 to 511,420 13715

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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508,937 + -1.3
509,071 - -0.4
509,236 - +0.5
509,251 - -0.9
509,387 - -1.6
509,395 - +0.5
509,526 + +0.1
509,529 + -0.7
509,680 + -0.7
509,704 + -0.8
509,820 - -0.1
509,826 + +0.7
509,989 - -0.3
510,002 - -0.3
510,128 + 13715 mRNA_5347 0.16 -0.5
510,298 - 13715 mRNA_5347 0.27 +0.4
510,433 + 13715 mRNA_5347 0.36 +0.3
510,554 + 13715 mRNA_5347 0.44 -0.0
510,571 - 13715 mRNA_5347 0.45 -1.6
510,716 + 13715 mRNA_5347 0.54 +1.0
510,870 - 13715 mRNA_5347 0.64 -0.0
510,893 - 13715 mRNA_5347 0.66 -0.3
511,040 - 13715 mRNA_5347 0.75 +0.3
511,442 - -0.7
511,465 - -0.5
511,628 - +0.3
511,643 + -0.5
511,906 - -0.4
511,914 + -1.1
512,063 + -0.4
512,192 - +0.3
512,359 - -0.3

Or see this region's nucleotide sequence