Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5403

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13770 and 13771 are separated by 283 nucleotides13771 and 13772 are separated by 897 nucleotides mRNA_5402: 13770 - KOG2938 Predicted inosine-uridine preferring nucleoside hydrolase, at 17,110 to 18,696 13770 mRNA_5403: 13771 - K00789 metK S-adenosylmethionine synthetase, at 18,980 to 21,610 13771 mRNA_5404: 13772 - Hypothetical Protein, at 22,508 to 23,850 13772

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
18,318 + 13770 mRNA_5402 0.76 -0.4
18,416 + 13770 mRNA_5402 0.82 +0.1
18,602 + -0.2
18,874 - +0.6
19,029 - +0.8
19,030 - -1.0
19,032 + -0.1
19,042 - +1.0
19,044 - +0.5
19,045 - +1.9
19,046 - +0.4
19,046 - +1.5
19,047 + +0.4
19,048 - +0.1
19,057 + +0.6
19,057 + -0.6
19,058 - +0.1
19,059 - -0.2
19,060 - -0.0
19,062 + -0.3
19,066 + +0.1
19,067 + +0.0
19,068 + +1.4
19,069 - +0.6
19,072 - -0.3
19,075 + +0.1
19,079 + +0.8
19,081 + -1.2
19,084 - -0.1
19,208 - +0.1
19,209 - -0.0
19,217 + +1.1
19,230 + +0.2
20,182 + 13771 mRNA_5403 0.46 -0.2
21,727 - -1.1
21,866 + +0.6
21,993 + +0.3
22,296 - -0.2
22,405 + +0.7
22,461 + +0.2
22,499 + +0.0
22,578 + +0.1
22,593 - -0.3
22,602 + -0.5

Or see this region's nucleotide sequence