Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5848

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14215 and 14216 are separated by 735 nucleotides mRNA_5847: 14215 - K17780 TIM8 mitochondrial import inner membrane translocase subunit TIM8, at 1,076,997 to 1,077,527 14215 mRNA_5848: 14216 - Hypothetical Protein, at 1,078,263 to 1,078,813 14216

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,077,383 - 14215 mRNA_5847 0.73 -0.6
1,077,392 + 14215 mRNA_5847 0.74 +0.7
1,077,404 - 14215 mRNA_5847 0.77 -0.3
1,078,002 - +0.4
1,078,005 - +0.4
1,078,012 + +0.2
1,078,110 + +0.5
1,078,275 - -0.5
1,078,720 + 14216 mRNA_5848 0.83 -0.3
1,079,040 + +0.8
1,079,158 - -0.5
1,079,459 + -0.1

Or see this region's nucleotide sequence