Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6186

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14553 and 14554 are separated by 197 nucleotides mRNA_6185: 14553 - SUPERFAMILY--SSF69118, at 203,886 to 204,987 14553 mRNA_6186: 14554 - K01613 psd, PISD phosphatidylserine decarboxylase, at 205,185 to 207,177 14554

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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204,317 + 14553 mRNA_6185 0.39 +1.2
204,441 + 14553 mRNA_6185 0.50 -0.3
205,010 + -2.7
205,038 + -1.5
205,193 + -0.3
207,367 - -0.1
207,374 - -0.2
207,504 + +0.5
207,774 + -0.5
207,795 + -1.3
208,121 - -1.2

Or see this region's nucleotide sequence