Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6271

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14638 and 14639 are separated by 0 nucleotides mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407,745 to 410,533 14638 mRNA_6271: 14639 - Hypothetical Protein, at 410,534 to 411,923 14639

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
409,955 - 14638 mRNA_6270 0.79 -0.8
410,165 - 14638 mRNA_6270 0.87 +1.5
410,174 + 14638 mRNA_6270 0.87 +1.1
410,301 - +0.6
410,447 - -1.8
410,471 + -0.8
410,476 - -0.8
410,572 + +0.3
410,592 - +0.8
410,599 + -0.1
410,601 + +0.4
410,606 + -0.3
410,607 + -0.5
410,617 - -0.9
410,765 - 14639 mRNA_6271 0.17 -0.0
410,770 - 14639 mRNA_6271 0.17 +0.9
410,781 + 14639 mRNA_6271 0.18 +1.9
410,781 - 14639 mRNA_6271 0.18 -0.1
410,789 + 14639 mRNA_6271 0.18 +0.1
410,792 + 14639 mRNA_6271 0.19 -0.9
410,792 - 14639 mRNA_6271 0.19 -0.3
410,797 - 14639 mRNA_6271 0.19 -1.0
410,816 + 14639 mRNA_6271 0.20 +0.1
410,925 - 14639 mRNA_6271 0.28 -0.7
410,928 + 14639 mRNA_6271 0.28 +0.5
411,080 + 14639 mRNA_6271 0.39 +0.2
411,095 - 14639 mRNA_6271 0.40 +0.7
411,106 + 14639 mRNA_6271 0.41 -2.7
411,190 + 14639 mRNA_6271 0.47 +1.0
411,233 - 14639 mRNA_6271 0.50 -1.3
411,253 - 14639 mRNA_6271 0.52 +0.0
411,254 + 14639 mRNA_6271 0.52 +0.2
411,398 - 14639 mRNA_6271 0.62 +0.8
411,522 - 14639 mRNA_6271 0.71 -0.7
411,527 - 14639 mRNA_6271 0.71 -0.4
412,013 - -0.8
412,013 + -0.1

Or see this region's nucleotide sequence