Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6584

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14951 and 14952 are separated by 257 nucleotides mRNA_6583: 14951 - Hypothetical Protein, at 1,155,972 to 1,156,740 14951 mRNA_6584: 14952 - BLAST conserved fungal protein [Moniliophthora roreri M..., at 1,156,998 to 1,158,923 14952

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,156,061 + 14951 mRNA_6583 0.12 +0.3
1,156,768 - -0.7
1,156,941 + -0.1
1,157,084 + -0.6
1,157,820 - 14952 mRNA_6584 0.43 -0.2
1,157,942 + 14952 mRNA_6584 0.49 -0.3
1,158,844 - -1.0
1,158,902 + -1.4
1,158,973 - -0.7
1,158,996 - -1.9
1,159,015 + -0.0
1,159,015 + +0.5
1,159,126 - -0.7
1,159,268 - +0.1
1,159,416 - +0.5
1,159,418 + -0.2
1,159,420 - -1.9
1,159,421 + -1.2
1,159,720 - -0.7
1,159,727 + +0.2

Or see this region's nucleotide sequence