Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6651

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15018 and 15019 are separated by 461 nucleotides mRNA_6650: 15018 - HMMPfam-Domain of unknown function (DUF1772)-PF08592, at 1,348,081 to 1,348,867 15018 mRNA_6651: 15019 - K20793 NAA50, NAT5 N-alpha-acetyltransferase 50, at 1,349,329 to 1,350,495 15019

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,348,541 + 15018 mRNA_6650 0.58 -0.0
1,348,552 - 15018 mRNA_6650 0.60 -0.4
1,348,558 + 15018 mRNA_6650 0.61 -0.3
1,348,617 - 15018 mRNA_6650 0.68 +0.5
1,348,716 + 15018 mRNA_6650 0.81 +0.3
1,348,787 - 15018 mRNA_6650 0.90 -0.5
1,348,983 + +0.2
1,349,007 + -0.0
1,349,013 - -0.0
1,349,024 + -0.0
1,349,145 + -0.9
1,349,146 + +1.0
1,349,149 + +0.3
1,349,155 - -0.5
1,349,158 - +0.2
1,349,277 - -0.4
1,349,459 + 15019 mRNA_6651 0.11 +1.5
1,350,107 - 15019 mRNA_6651 0.67 -1.3
1,350,259 + 15019 mRNA_6651 0.80 -0.3
1,350,264 - 15019 mRNA_6651 0.80 -0.2
1,350,271 - 15019 mRNA_6651 0.81 -1.3
1,350,408 + +0.4
1,350,594 - -1.5
1,351,112 - +1.7

Or see this region's nucleotide sequence