Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6790

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15157 and 15158 are separated by 524 nucleotides15158 and 15159 are separated by 92 nucleotides mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131,775 to 132,958 15157 mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133,483 to 136,016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136,109 to 143,352 15159

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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132,612 - 15157 mRNA_6789 0.71 -2.0
133,013 + -0.1
133,161 - +0.2
133,257 - +0.0
133,282 - +0.8
133,286 - +0.6
133,287 - +0.1
133,288 - -0.1
133,294 - +0.8
133,296 + +0.7
133,300 - -1.2
133,306 + -0.4
133,309 + +0.4
133,339 + +0.3
133,344 + -0.1
133,354 + -0.6
133,366 + -0.3
133,449 - +0.1
133,458 - -0.3
136,054 - +0.4
136,066 - +0.3
136,069 - -0.8
136,071 + +0.4
136,079 + -0.3
136,093 + -0.6
136,093 + +1.3

Or see this region's nucleotide sequence