Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6851

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15218 and 15219 are separated by 209 nucleotides mRNA_6850: 15218 - K05605 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, at 272,004 to 274,065 15218 mRNA_6851: 15219 - Hypothetical Protein, at 274,275 to 275,000 15219

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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273,291 - 15218 mRNA_6850 0.62 -1.0
273,308 + 15218 mRNA_6850 0.63 -0.4
273,895 + +0.1
274,289 + -0.0
274,298 + -0.9
274,314 - +0.5
274,405 - 15219 mRNA_6851 0.18 -0.8
274,585 - 15219 mRNA_6851 0.43 -0.4
274,747 - 15219 mRNA_6851 0.65 +0.0
274,893 - 15219 mRNA_6851 0.85 -0.6
275,921 + -0.0

Or see this region's nucleotide sequence