Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6926

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15293 and 15294 are separated by 176 nucleotides15294 and 15295 are separated by 234 nucleotides mRNA_6925: 15293 - K02331 POL5, MYBBP1A DNA polymerase phi, at 446,831 to 450,905 15293 mRNA_6926: 15294 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 451,082 to 452,962 15294 mRNA_6927: 15295 - Hypothetical Protein, at 453,197 to 455,324 15295

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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450,962 + +0.4
450,965 + +0.1
450,969 + +0.1
450,973 + -0.7
450,974 + +0.6
450,987 + -0.9
450,989 - -0.4
450,989 + +0.3
450,994 - -0.9
451,000 + -3.2
451,002 - -0.1
451,022 + +0.6
451,137 - +0.1
451,279 - 15294 mRNA_6926 0.10 +0.6
451,300 - 15294 mRNA_6926 0.12 -0.9
451,458 - 15294 mRNA_6926 0.20 -0.4
452,446 + 15294 mRNA_6926 0.73 +0.6
452,777 + +0.2
452,976 + -0.1
453,012 - -0.3
453,843 - 15295 mRNA_6927 0.30 -0.3
453,930 - 15295 mRNA_6927 0.34 +0.2

Or see this region's nucleotide sequence