Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7134

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15502 and 15503 are separated by 195 nucleotides mRNA_7134: 15502 - Hypothetical Protein, at 959,063 to 959,893 15502 mRNA_7135: 15503 - K02948 RP-S11, MRPS11, rpsK small subunit ribosomal protein S11, at 960,089 to 960,921 15503

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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958,436 - -1.0
959,062 + +0.3
959,211 + 15502 mRNA_7134 0.18 -0.8
959,609 - 15502 mRNA_7134 0.66 +0.2
959,611 - 15502 mRNA_7134 0.66 +0.1
959,758 - 15502 mRNA_7134 0.84 +0.5
959,763 + 15502 mRNA_7134 0.84 +1.2
960,038 - -0.1
960,039 - -0.8
960,045 + -0.1
960,048 + +0.1

Or see this region's nucleotide sequence