Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7190

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15557 and 15558 are separated by 265 nucleotides15558 and 15559 are separated by 356 nucleotides mRNA_7189: 15557 - K14847 RPF2 ribosome production factor 2, at 1,083,757 to 1,085,072 15557 mRNA_7190: 15558 - Hypothetical Protein, at 1,085,338 to 1,086,300 15558 mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494 15559

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,085,431 + +0.7
1,085,553 + 15558 mRNA_7190 0.22 -0.2
1,085,994 + 15558 mRNA_7190 0.68 +1.0
1,086,246 + -1.9

Or see this region's nucleotide sequence