Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7451

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15818 and 15819 are separated by 512 nucleotides15819 and 15820 are separated by 717 nucleotides mRNA_7450: 15818 - BLAST proteophosphoglycan protein, putative [Rhizoctonia so..., at 305,552 to 306,799 15818 mRNA_7451: 15819 - Hypothetical Protein, at 307,312 to 308,652 15819 mRNA_7452: 15820 - K14852 RRS1 regulator of ribosome biosynthesis, at 309,370 to 310,696 15820

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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306,474 + 15818 mRNA_7450 0.74 -2.1
306,896 - -0.2
307,115 + -0.6
307,651 - 15819 mRNA_7451 0.25 +1.4
307,659 - 15819 mRNA_7451 0.26 +0.6
307,801 - 15819 mRNA_7451 0.36 +0.8
307,978 + 15819 mRNA_7451 0.50 -0.2
308,097 - 15819 mRNA_7451 0.59 +0.9
308,098 - 15819 mRNA_7451 0.59 -0.7
308,106 - 15819 mRNA_7451 0.59 +0.2
308,110 + 15819 mRNA_7451 0.60 -0.5
308,114 + 15819 mRNA_7451 0.60 +1.7
308,116 + 15819 mRNA_7451 0.60 -0.2
308,404 - 15819 mRNA_7451 0.81 -1.5
308,412 + 15819 mRNA_7451 0.82 +0.1
308,419 + 15819 mRNA_7451 0.83 +0.3
308,695 - +0.2
308,708 + +0.1
308,710 - +0.8
308,717 - -0.2
308,723 + -0.0
308,838 - +0.1
308,846 + -0.1
308,846 + -0.2
308,849 - +1.1
308,854 - -0.2
308,860 - -0.9
308,962 + +0.6
308,986 + +0.3
309,145 + -2.5
309,315 - +1.0
309,316 - -0.8

Or see this region's nucleotide sequence