Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7498

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15865 and 15866 are separated by 224 nucleotides mRNA_7497: 15865 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 430,660 to 431,671 15865 mRNA_7498: 15866 - Hypothetical Protein, at 431,896 to 432,524 15866

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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430,983 + 15865 mRNA_7497 0.32 -0.3
431,021 + 15865 mRNA_7497 0.36 -1.4
431,028 + 15865 mRNA_7497 0.36 -0.1
431,159 + 15865 mRNA_7497 0.49 +1.5
431,160 + 15865 mRNA_7497 0.49 +0.3
431,300 + 15865 mRNA_7497 0.63 +0.8
431,586 + -1.0
431,587 + -1.0
431,720 - -0.2
431,736 - -0.1
431,744 + -1.5
431,749 + +0.0
431,818 - -0.7
431,945 - +0.2
431,953 + -0.2
432,100 + 15866 mRNA_7498 0.32 +0.6
432,103 - 15866 mRNA_7498 0.33 -0.0
432,238 - 15866 mRNA_7498 0.54 +0.5
432,244 - 15866 mRNA_7498 0.55 -0.2
432,382 - 15866 mRNA_7498 0.77 +1.5
432,396 - 15866 mRNA_7498 0.79 +1.1
432,674 - +0.2
432,679 + -0.6
432,809 - +0.3
432,810 - -0.3
433,113 + -0.3
433,220 - -0.3

Or see this region's nucleotide sequence