Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7750

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16117 and 16118 overlap by 11 nucleotides16118 and 16119 are separated by 670 nucleotides mRNA_7749: 16117 - Hypothetical Protein, at 981,681 to 982,227 16117 mRNA_7750: 16118 - Hypothetical Protein, at 982,217 to 982,643 16118 mRNA_7751: 16119 - Hypothetical Protein, at 983,314 to 984,554 16119

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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981,218 + -1.0
981,222 + -0.2
981,224 + -0.6
981,224 + +0.2
981,370 + +0.5
981,647 - +0.7
981,657 - -0.9
981,679 - +0.1
981,828 + 16117 mRNA_7749 0.27 -0.8
981,946 - 16117 mRNA_7749 0.48 -0.2
981,983 - 16117 mRNA_7749 0.55 +0.4
982,244 - +0.2
982,362 - 16118 mRNA_7750 0.34 -0.8
982,392 - 16118 mRNA_7750 0.41 -0.5
982,434 - 16118 mRNA_7750 0.51 -0.0
982,533 + 16118 mRNA_7750 0.74 +0.2
982,668 + +0.4
982,884 - +0.1
983,424 + +2.0

Or see this region's nucleotide sequence