Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8174

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16542 and 16543 are separated by 281 nucleotides mRNA_8174: 16542 - K00645 fabD [acyl-carrier-protein] S-malonyltransferase, at 598,873 to 600,672 16542 mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600,954 to 602,417 16543

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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597,900 + -1.8
597,941 + +0.4
598,203 - -0.2
598,226 - -0.3
598,345 + +0.1
598,345 + -1.7
598,345 + -0.5
598,440 + -0.4
598,452 + +0.3
598,465 - -2.1
598,471 - -0.4
598,471 - -0.8
598,481 + -0.7
598,483 + +0.4
598,493 + +0.0
598,494 - +0.3
598,498 + +0.5
598,499 + +0.1
598,501 + +0.3
598,510 - -0.0
598,514 + -0.9
598,520 + -0.2
598,520 + +0.0
598,520 + +0.2
598,809 - +0.0
598,809 - -1.0
598,815 + -0.1
598,820 - -0.2
598,974 + +0.4
599,002 - -0.1
599,396 + 16542 mRNA_8174 0.29 +0.6
599,853 - 16542 mRNA_8174 0.54 -0.7
600,261 + 16542 mRNA_8174 0.77 -0.8
600,851 - +2.1
600,980 + -1.1

Or see this region's nucleotide sequence