Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_519

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8887 and 8888 are separated by 97 nucleotides mRNA_519: 8887 - KOG0767 Mitochondrial phosphate carrier protein, at 1,234,410 to 1,235,210 8887 mRNA_520: 8888 - Hypothetical Protein, at 1,235,308 to 1,236,592 8888

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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1,233,614 - -0.2
1,233,709 - -0.1
1,234,028 - -0.9
1,234,308 + -0.6
1,234,786 - 8887 mRNA_519 0.47 -0.2
1,235,651 - 8888 mRNA_520 0.27 +0.1
1,235,680 + 8888 mRNA_520 0.29 -0.6

Or see this region's nucleotide sequence