Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1104

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9471 and 9472 are separated by 986 nucleotides9472 and 9473 are separated by 953 nucleotides mRNA_1103: 9471 - KOG0252 Inorganic phosphate transporter, at 410,090 to 412,457 9471 mRNA_1104: 9472 - K02540 MCM2 DNA replication licensing factor MCM2, at 413,444 to 416,551 9472 mRNA_1105: 9473 - Hypothetical Protein, at 417,505 to 418,471 9473

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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412,669 + -0.9
412,752 - -0.5
412,757 - -0.5
412,812 + -1.0
412,826 + -0.2
412,839 + +0.6
412,957 - +0.3
412,957 - -0.7
412,977 + +0.0
412,982 + -0.1
413,091 + +0.2
413,130 - -0.2
413,130 + -0.7
413,137 - +0.9
413,148 - -1.2
413,155 + +0.9
413,211 + -0.8
413,216 + +0.1
413,217 - +0.4
413,218 - -0.5
413,252 + +0.5
413,257 + -2.1
413,269 - -0.0
413,372 + +0.1
413,527 + +0.9
416,824 - +1.0
416,865 + -0.5
416,869 + -0.6

Or see this region's nucleotide sequence