Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1250

Experiment: YNB Oleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9618 and 9619 are separated by 264 nucleotides mRNA_1250: 9618 - Hypothetical Protein, at 754,124 to 756,266 9618 mRNA_1251: 9619 - HMMPfam-Protein of unknown function (DUF2611)-PF11022, at 756,531 to 757,355 9619

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
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753,126 + -1.5
753,138 - -1.1
753,138 - -0.3
753,145 - -0.1
753,150 - -0.5
753,264 + -1.0
753,269 + +0.2
753,393 + -0.9
753,406 - +0.4
753,416 + -0.7
753,426 + +0.0
753,438 + -1.5
753,450 + -0.9
753,719 - -0.3
753,846 - +0.5
753,866 + +0.3
754,012 - +0.1
754,018 + -0.2
754,100 - -0.4
754,167 + +0.1
754,303 - +0.4
754,333 + +0.3
755,012 - 9618 mRNA_1250 0.41 -0.7
755,913 - 9618 mRNA_1250 0.83 -1.1
756,465 - +0.3
756,469 + -0.1
756,472 + -0.2
756,482 - +0.2
756,486 - +1.0
756,487 + +1.2
756,488 - -0.8
756,647 + 9619 mRNA_1251 0.14 +0.7
756,671 + 9619 mRNA_1251 0.17 +0.3
756,786 + 9619 mRNA_1251 0.31 -0.9
756,797 + 9619 mRNA_1251 0.32 +0.1
757,182 + 9619 mRNA_1251 0.79 -0.2
757,183 - 9619 mRNA_1251 0.79 +0.1

Or see this region's nucleotide sequence