Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1462

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9829 and 9830 are separated by 349 nucleotides9830 and 9831 are separated by 236 nucleotides mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346,696 to 347,592 9829 mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347,942 to 349,022 9830 mRNA_1463: 9831 - K08850 AURKX aurora kinase, other, at 349,259 to 351,388 9831

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
347,199 + 9829 mRNA_1461 0.56 +0.4
347,208 + 9829 mRNA_1461 0.57 -0.1
347,287 + 9829 mRNA_1461 0.66 -1.1
347,330 + 9829 mRNA_1461 0.71 +0.1
347,489 + 9829 mRNA_1461 0.88 +0.9
347,761 + -0.0
347,872 + -0.0
349,049 - -1.0
349,088 + +0.5
349,099 + +0.6

Or see this region's nucleotide sequence