Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1491

Experiment: YNB Oleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9859 and 9860 are separated by 769 nucleotides mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432,599 to 433,571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434,341 to 437,683 9860

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Oleic Acid
remove
431,640 - -0.4
431,643 + -0.1
431,647 + -0.6
431,653 + -0.5
431,658 - -0.8
431,797 - +0.6
431,807 + -1.0
431,918 + -0.5
431,936 - -1.9
431,957 + -0.1
432,095 + -0.6
432,215 + -0.9
432,251 + -0.1
432,260 + -1.0
432,265 + +0.0
432,382 + -1.0
432,416 + -2.8
432,720 + 9859 mRNA_1491 0.12 +1.2
433,836 - +0.7
433,866 - -0.9
433,874 - -0.5
433,895 + +1.3
433,924 - -0.8
434,004 - -0.4
434,015 + -1.8
434,140 - +0.7
434,286 + +0.4
434,298 + +0.4

Or see this region's nucleotide sequence